Welcome to the Auto-p2docking v1 manual!
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.. toctree::
   :maxdepth: 2
   :caption: Auto-p2docking v1

   overview
   version_customization
   script
   protocols
   pipeliner

.. toctree::
   :maxdepth: 2
   :caption: Built-in modules

   modules_1_ligand_selection
   modules_2_PDB_retrieval_and_selection
   modules_3_active_and_passive_sites_selection
   modules_4_docking
   modules_5_surface_extraction
   modules_6_data_analysis_and_visualization
   modules_7_special

.. toctree::
   :maxdepth: 2
   :caption: References

   references
   evoppi_querier_options